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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST002484
species:
Saccharum officinarum
miRNA family:
MIRf10
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTAGGCTTAAAAAATTCGTCT
miRNA*
ACGAATTTATTAAGCCTAATT
mismatches:
1
bulges:
0
View larger
pre-miRNA
GTAACTCGCGAG
ACGAATTTATTAAGCCTAATT
AATCCGTCATTAACACATTTTTACTGTAGCATCACATTATCAATTATGGACTAA
TTAGGCTTAAAAA
ATTCGTCT
CACAAAATG
dot-bracket secondary structure
.........(((
((((((((.((((((((((((
(.(((((.(((..........((.(((......))).))..))).))))).)))
)))))))))).))
))))))))
)........
SIMILARITIES
miRBase
osa-MIR442
:
2e-27
PMRD
osa-miR442
:
2e-27
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record